iPat: intelligent prediction and association tool for genomic research
نویسندگان
چکیده
منابع مشابه
Locally Epistatic Genomic Relationship Matrices for Genomic Association and Prediction
In plant and animal breeding studies a distinction is made between the genetic value (additive plus epistatic genetic effects) and the breeding value (additive genetic effects) of an individual since it is expected that some of the epistatic genetic effects will be lost due to recombination. In this article, we argue that the breeder can take advantage of the epistatic marker effects in regions...
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Most human diseases and agriculturally important traits are complex. Dissecting their genetic architecture requires continued development of innovative and powerful statistical methods. Corresponding advances in computing tools are critical to efficiently use these statistical innovations and to enhance and accelerate biomedical and agricultural research and applications. The genome association...
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This paper proposes an interactive parallelizing assistance tool for OpenMP called iPat/OMP. This tool provides users with the assistance needed for OpenMP parallelization of a sequential program. All of the assistance capabilities are implemented as Emacs functions and are available in the Emacs editor environment in an interactive manner.
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UNLABELLED IGIPT is a web-based integrated platform for the identification of genomic islands (GIs). It incorporates thirteen parametric measures based on anomalous nucleotide composition on a single platform, thus improving the predictive power of a horizontally acquired region, since it is known that no single measure can absolutely predict a horizontally transferred region. The tool filters ...
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ژورنال
عنوان ژورنال: Bioinformatics
سال: 2018
ISSN: 1367-4803,1460-2059
DOI: 10.1093/bioinformatics/bty015